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Background color for cell id.

master
Lukas Prause 2 years ago
parent
commit
675764bdc6
1 changed files with 3 additions and 3 deletions
  1. +3
    -3
      plot_transmission_timeline.py

+ 3
- 3
plot_transmission_timeline.py View File

i += 1 i += 1


cmap = matplotlib.cm.get_cmap("Set3") cmap = matplotlib.cm.get_cmap("Set3")
for cell_id in transmission_df["cellID"].unique():
bounds = transmission_df[["index", "cellID"]].groupby("cellID").agg(["min", "max"]).loc[cell_id]
host.axvspan(bounds.min(), bounds.max(), alpha=0.3, color=cmap.colors[color_dict[cell_id]])
for c in transmission_df["cellID"].unique():
bounds = transmission_df[["index", "cellID"]].groupby("cellID").agg(["min", "max"]).loc[c]
host.axvspan(bounds.min(), bounds.max(), alpha=0.3, color=cmap.colors[color_dict[c]])


plt.subplots_adjust() plt.subplots_adjust()



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