diff --git a/plot_transmission_timeline.py b/plot_transmission_timeline.py index f13ea92..43a83da 100755 --- a/plot_transmission_timeline.py +++ b/plot_transmission_timeline.py @@ -189,9 +189,11 @@ if __name__ == "__main__": host = host_subplot(111, axes_class=axisartist.Axes) + transmission_df["index"] = transmission_df.index + cmap = matplotlib.cm.get_cmap("Set3") for c in transmission_df["cellID"].unique(): - bounds = transmission_df[[transmission_df.index, "cellID"]].groupby("cellID").agg(["min", "max"]).loc[c] + bounds = transmission_df[["index", "cellID"]].groupby("cellID").agg(["min", "max"]).loc[c] host.axvspan(bounds.min(), bounds.max() + 1, alpha=0.3, color=cmap.colors[c]) plt.subplots_adjust()