Browse Source

Extends color list for cell plotting.

master
Lukas Prause 2 years ago
parent
commit
d3880d4ffc
2 changed files with 2 additions and 2 deletions
  1. +1
    -1
      plot_single_transmission_timeline.py
  2. +1
    -1
      plot_transmission_timeline.py

+ 1
- 1
plot_single_transmission_timeline.py View File



cmap = matplotlib.cm.get_cmap("Set3") cmap = matplotlib.cm.get_cmap("Set3")
unique_cells = transmission_df["cell_color"].unique() unique_cells = transmission_df["cell_color"].unique()
color_list = cmap * (round(len(unique_cells) / len(cmap)) + 1)
color_list = cmap.colors * (round(len(unique_cells) / len(cmap.colors)) + 1)


for c in transmission_df["cell_color"].unique(): for c in transmission_df["cell_color"].unique():
bounds = transmission_df[["index", "cell_color"]].groupby("cell_color").agg(["min", "max"]).loc[c] bounds = transmission_df[["index", "cell_color"]].groupby("cell_color").agg(["min", "max"]).loc[c]

+ 1
- 1
plot_transmission_timeline.py View File



cmap = matplotlib.cm.get_cmap("Set3") cmap = matplotlib.cm.get_cmap("Set3")
unique_cells = transmission_df["cell_color"].unique() unique_cells = transmission_df["cell_color"].unique()
color_list = cmap * (round(len(unique_cells) / len(cmap)) + 1)
color_list = cmap.colors * (round(len(unique_cells) / len(cmap.colors)) + 1)


for c in transmission_df["cell_color"].unique(): for c in transmission_df["cell_color"].unique():
bounds = transmission_df[["index", "cell_color"]].groupby("cell_color").agg(["min", "max"]).loc[c] bounds = transmission_df[["index", "cell_color"]].groupby("cell_color").agg(["min", "max"]).loc[c]

Loading…
Cancel
Save